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Purifibre

Tag: purifibre
Category: Streamline filter

Not the authoritative implementation

TRXViz provides re-implementations or ports of the methods referenced below. These implementations are NOT the authoritative versions — for the canonical implementations, please use the original software packages. Any differences in behavior or bugs are the responsibility of TRXViz, not the original authors. The presence of a citation here indicates only that TRXViz uses a method derived from that work and that users should credit the original authors; it does not imply that the original authors have reviewed, contributed to, or endorsed TRXViz.

Ports

Direction # Kind
Input 0 Streamlines
Input 1 Direction field
Output 0 Scored (all)
Output 1 Filtered

Parameters

Field Default
puri_fraction 0.10000000149011612
spherical_smoothing_deg 15.0
trim_fraction 0.10000000149011612

Citations

When you use this op in a published workflow, please credit the original authors whose methods TRXViz re-implements or ports:


  1. Dogu Baran Aydogan and Yonggang Shi. Purifibre: fod-coherence based streamline filtering. TODO, TODO. TODO: confirm canonical Purifibre citation (method paper). 

  2. Dogu Baran Aydogan and others. Nibrary: neuroimaging library for tractography and related methods. TODO: fill in canonical citation (Aydogan group, nibrary).