Prepare Hausdorff Plan
Tag: prepare_hausdorff_plan
Category: Tractography
Not the authoritative implementation
TRXViz provides re-implementations or ports of the methods referenced below. These implementations are NOT the authoritative versions — for the canonical implementations, please use the original software packages. Any differences in behavior or bugs are the responsibility of TRXViz, not the original authors. The presence of a citation here indicates only that TRXViz uses a method derived from that work and that users should credit the original authors; it does not imply that the original authors have reviewed, contributed to, or endorsed TRXViz.
Ports
| Direction | # | Kind |
|---|---|---|
| Input | 0 | ODF Field |
| Input | 1 | Streamline |
| Output | 0 | Plan |
| Output | 1 | Seed Mask |
| Output | 2 | Limiting Mask |
| Output | 3 | No-End Mask |
Parameters
| Field | Default |
|---|---|
max_reference_points |
20000 |
not_end_fixel_otsu_factor |
0.8999999761581421 |
otsu_scope |
"all_fixels" |
seed_fixel_otsu_factor |
0.5 |
seed_tolerance_mm |
2.0 |
tolerance_mm |
12.0 |
tracking_metric |
null |
Citations
When you use this op in a published workflow, please credit the original authors whose methods TRXViz re-implements or ports:
-
Fang-Cheng Yeh. Shape analysis of the human association pathways. NeuroImage, 223:117329, 2020. doi:10.1016/j.neuroimage.2020.117329. ↩